Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm3793-201ENSMUST00000204973 672 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm44980-201ENSMUST00000205826 314 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.04□□□□□ -0.64
Shank1D3YZU1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Shank1D3YZU1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Gm15595-201ENSMUST00000120840 961 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Gm5733-201ENSMUST00000190232 939 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Gm22144-201ENSMUST00000157402 102 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.03□□□□□ -0.64
Shank1D3YZU1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shank1D3YZU1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shank1D3YZU1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.02□□□□□ -0.65
Shank1D3YZU1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.02□□□□□ -0.65
Shank1D3YZU1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.02□□□□□ -0.65
Shank1D3YZU1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.02□□□□□ -0.65
Shank1D3YZU1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms