Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Clip3B9EHT4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.02□□□□□ -0.48
Clip3B9EHT4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.02□□□□□ -0.49
Clip3B9EHT4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gm38092-201ENSMUST00000195600 653 ntBASIC12.02□□□□□ -0.49
Clip3B9EHT4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip3B9EHT4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.01□□□□□ -0.49
Clip3B9EHT4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.01□□□□□ -0.49
Clip3B9EHT4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.01□□□□□ -0.49
Clip3B9EHT4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.01□□□□□ -0.49
Clip3B9EHT4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.01□□□□□ -0.49
Clip3B9EHT4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.01□□□□□ -0.49
Clip3B9EHT4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip3B9EHT4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip3B9EHT4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12□□□□□ -0.49
Clip3B9EHT4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms