Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp42B2RQC2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp42B2RQC2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp42B2RQC2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp42B2RQC2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp42B2RQC2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm11989-201ENSMUST00000117240 672 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm11362-201ENSMUST00000118838 850 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm12164-201ENSMUST00000121695 551 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm15276-201ENSMUST00000145953 498 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Mir6420-201ENSMUST00000185032 102 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Rprl1-202ENSMUST00000198476 238 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm45598-202ENSMUST00000210719 986 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.36□□□□□ -0.11
Usp42B2RQC2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp42B2RQC2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm25890-201ENSMUST00000177643 165 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm22614-201ENSMUST00000178300 165 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm22042-201ENSMUST00000082989 165 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm26110-201ENSMUST00000083971 165 ntBASIC14.35□□□□□ -0.11
Usp42B2RQC2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp42B2RQC2 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.34□□□□□ -0.11
Usp42B2RQC2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Usp42B2RQC2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp42B2RQC2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms