Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm14892-201ENSMUST00000117636 267 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm18776-201ENSMUST00000188833 654 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm43912-201ENSMUST00000204352 538 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm18463-201ENSMUST00000207258 474 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm18460-201ENSMUST00000208088 464 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a6B1AVK5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm14441-201ENSMUST00000121960 540 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm5621-201ENSMUST00000187303 640 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm19587-201ENSMUST00000191395 545 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm3726-201ENSMUST00000203110 785 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm17825-201ENSMUST00000206836 794 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a6B1AVK5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a6B1AVK5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.4□□□□□ -0.43
Col4a6B1AVK5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm13022-201ENSMUST00000121181 285 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm9089-201ENSMUST00000122027 526 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm8723-201ENSMUST00000166076 820 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm8701-201ENSMUST00000169259 874 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm42816-201ENSMUST00000198433 325 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm39288-201ENSMUST00000210554 446 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms