Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm23555-201ENSMUST00000157815 135 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm5254-201ENSMUST00000188353 977 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm8956-201ENSMUST00000203939 825 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 AC164618.2-201ENSMUST00000224770 573 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm10371-202ENSMUST00000228010 1081 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm37691-201ENSMUST00000192147 2573 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm37582-201ENSMUST00000192953 1409 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm23899-201ENSMUST00000158112 90 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm8643-201ENSMUST00000195228 625 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm22711-202ENSMUST00000197029 135 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm36990-201ENSMUST00000191961 1412 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm15636-201ENSMUST00000119205 668 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 AC113082.1-201ENSMUST00000217324 327 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 AC164556.1-201ENSMUST00000221318 751 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm4782-201ENSMUST00000168705 2046 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Mir1249-201ENSMUST00000116791 98 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm15664-201ENSMUST00000160167 184 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm8255-201ENSMUST00000218693 305 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 CT009546.1-201ENSMUST00000222573 1120 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 AC153153.1-201ENSMUST00000225803 793 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm16477-201ENSMUST00000085365 801 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms