Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm8738-201ENSMUST00000172606 329 ntBASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm44958-201ENSMUST00000203734 736 ntBASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc112A0AUP1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Gm11478-201ENSMUST00000117851 599 ntBASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc112A0AUP1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm6222-202ENSMUST00000182143 629 ntBASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm10076-201ENSMUST00000073238 384 ntBASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc112A0AUP1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms