Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smim17A0A504 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Smim17A0A504 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 Gm12485-201ENSMUST00000119641 291 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Gm46209-201ENSMUST00000217912 553 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 Gm5779-201ENSMUST00000218467 910 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smim17A0A504 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.12□□□□□ -0.63
Smim17A0A504 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smim17A0A504 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.12□□□□□ -0.63
Smim17A0A504 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smim17A0A504 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim17A0A504 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smim17A0A504 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.11□□□□□ -0.63
Smim17A0A504 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Smim17A0A504 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Gm6415-201ENSMUST00000118488 348 ntBASIC11.11□□□□□ -0.63
Smim17A0A504 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Smim17A0A504 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Smim17A0A504 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.11□□□□□ -0.63
Smim17A0A504 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.11□□□□□ -0.63
Smim17A0A504 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smim17A0A504 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim17A0A504 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smim17A0A504 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.1□□□□□ -0.63
Smim17A0A504 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smim17A0A504 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smim17A0A504 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.1□□□□□ -0.63
Smim17A0A504 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smim17A0A504 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.1□□□□□ -0.63
Smim17A0A504 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smim17A0A504 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Gm2756-201ENSMUST00000195851 400 ntBASIC11.1□□□□□ -0.63
Smim17A0A504 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smim17A0A504 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.1□□□□□ -0.63
Smim17A0A504 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim17A0A504 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms