Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm27243-201ENSMUST00000183964 521 ntBASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm5053-201ENSMUST00000208361 1678 ntBASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 AC140406.1-201ENSMUST00000226481 465 ntBASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms