Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.1□□□□□ -0.79
Trav18A0A075B656 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav18A0A075B656 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.09□□□□□ -0.79
Trav18A0A075B656 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm13315-201ENSMUST00000120376 991 ntBASIC10.09□□□□□ -0.79
Trav18A0A075B656 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm26927-201ENSMUST00000182385 965 ntBASIC10.09□□□□□ -0.79
Trav18A0A075B656 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm44882-201ENSMUST00000205702 802 ntBASIC10.09□□□□□ -0.79
Trav18A0A075B656 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm22058-201ENSMUST00000083393 310 ntBASIC10.09□□□□□ -0.79
Trav18A0A075B656 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.09□□□□□ -0.79
Trav18A0A075B656 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav18A0A075B656 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav18A0A075B656 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm12502-201ENSMUST00000120197 444 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm16177-201ENSMUST00000120728 718 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm1335-201ENSMUST00000121653 386 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm8018-201ENSMUST00000173536 789 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm6007-201ENSMUST00000208170 823 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.08□□□□□ -0.8
Trav18A0A075B656 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms