Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm42627-201ENSMUST00000197347 224 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Gm12742-201ENSMUST00000117326 410 ntBASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Gm14127-201ENSMUST00000117906 678 ntBASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Mir7085-201ENSMUST00000184353 66 ntBASIC12.31□□□□□ -0.44
H2afb2S4R1M3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb2S4R1M3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm27572-201ENSMUST00000183702 255 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm9823-201ENSMUST00000051212 327 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms