Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.04□□□□□ -0.48
Col4a4Q9QZR9 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm12389-201ENSMUST00000117696 418 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm12418-201ENSMUST00000118116 942 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm13039-201ENSMUST00000118638 794 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm7741-201ENSMUST00000181445 989 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm45310-201ENSMUST00000210436 275 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm9487-201ENSMUST00000216600 472 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a4Q9QZR9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.02□□□□□ -0.48
Col4a4Q9QZR9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a4Q9QZR9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a4Q9QZR9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a4Q9QZR9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a4Q9QZR9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.02□□□□□ -0.48
Col4a4Q9QZR9 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm24279-201ENSMUST00000104236 131 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm15374-201ENSMUST00000119313 844 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm25554-201ENSMUST00000158075 113 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm25830-201ENSMUST00000158923 132 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm23694-201ENSMUST00000179335 110 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm7627-201ENSMUST00000183205 999 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm26670-202ENSMUST00000226862 340 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a4Q9QZR9 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a4Q9QZR9 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms