Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm45224-201ENSMUST00000208203 414 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm45598-202ENSMUST00000210719 986 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf3Q9QXK7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm15236-201ENSMUST00000117309 379 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm26361-201ENSMUST00000158868 186 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm32999-201ENSMUST00000192693 562 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm45186-201ENSMUST00000206874 478 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm18056-201ENSMUST00000207670 568 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm18061-201ENSMUST00000208350 562 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm18063-201ENSMUST00000208529 568 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm18052-201ENSMUST00000208750 559 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf3Q9QXK7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 196.9 ms