Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gm2383-201ENSMUST00000181461 807 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gm45878-201ENSMUST00000211839 241 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC11.27□□□□□ -0.6
Prg4Q9JM99 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prg4Q9JM99 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
Prg4Q9JM99 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Prg4Q9JM99 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Prg4Q9JM99 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prg4Q9JM99 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm4034-201ENSMUST00000187674 480 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm18056-201ENSMUST00000207670 568 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm18061-201ENSMUST00000208350 562 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm18063-201ENSMUST00000208529 568 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm18052-201ENSMUST00000208750 559 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Gm8913-201ENSMUST00000209491 641 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.27□□□□□ -0.61
Prg4Q9JM99 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prg4Q9JM99 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Prg4Q9JM99 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prg4Q9JM99 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prg4Q9JM99 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms