Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Rpph1-201ENSMUST00000175096 319 ntBASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm27631-201ENSMUST00000184163 466 ntBASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Smco4Q9JIS3 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm13813-201ENSMUST00000120998 787 ntBASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms