Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp2aQ9DB34 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm13350-201ENSMUST00000120519 479 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm14760-201ENSMUST00000121831 999 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm13570-201ENSMUST00000140763 309 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm7783-201ENSMUST00000204795 781 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp2aQ9DB34 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm23270-201ENSMUST00000104055 131 ntBASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm12314-201ENSMUST00000118104 538 ntBASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2aQ9DB34 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms