Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm28760-201ENSMUST00000185995 736 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm44397-201ENSMUST00000195950 113 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm5687-201ENSMUST00000118252 640 ntBASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim42Q9D2H5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.36□□□□□ -0.43
Trim42Q9D2H5 Gm14760-201ENSMUST00000121831 999 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms