Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.29■□□□□ 0.04
Nip7Q9CXK8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.29■□□□□ 0.04
Nip7Q9CXK8 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nip7Q9CXK8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm23912-201ENSMUST00000104687 87 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm11628-201ENSMUST00000117568 171 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm11663-201ENSMUST00000117888 290 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gm9463-201ENSMUST00000206707 601 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nip7Q9CXK8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm22144-201ENSMUST00000157402 102 ntBASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm8194-201ENSMUST00000159783 859 ntBASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Gm5705-201ENSMUST00000066241 711 ntBASIC15.27■□□□□ 0.04
Nip7Q9CXK8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nip7Q9CXK8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms