Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm11964-201ENSMUST00000120982 444 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm24548-201ENSMUST00000158650 108 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm2383-201ENSMUST00000181461 807 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smc1aQ9CU62 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Gm10434-201ENSMUST00000101158 471 ntBASIC13.82□□□□□ -0.2
Smc1aQ9CU62 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1aQ9CU62 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Gm18753-201ENSMUST00000201000 566 ntBASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1aQ9CU62 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms