Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm8451-201ENSMUST00000170338 447 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm26272-201ENSMUST00000179241 132 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Trav11n-201ENSMUST00000200113 343 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm7536-201ENSMUST00000077389 444 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm5453-201ENSMUST00000080866 447 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh15Q99PJ1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Gm26670-202ENSMUST00000226862 340 ntBASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh15Q99PJ1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Gm13204-201ENSMUST00000120110 821 ntBASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Gm14993-201ENSMUST00000121180 164 ntBASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Gm20495-201ENSMUST00000173902 235 ntBASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Gm42511-201ENSMUST00000196160 234 ntBASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh15Q99PJ1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm25492-201ENSMUST00000157383 129 ntBASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm24328-201ENSMUST00000175104 67 ntBASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm44216-201ENSMUST00000203942 157 ntBASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm7238-201ENSMUST00000206467 973 ntBASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms