Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.99□□□□□ -0.33
Clp1Q99LI9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.99□□□□□ -0.33
Clp1Q99LI9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clp1Q99LI9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gm11451-201ENSMUST00000118946 630 ntBASIC12.98□□□□□ -0.33
Clp1Q99LI9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clp1Q99LI9 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm12899-201ENSMUST00000120565 551 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm8492-201ENSMUST00000182375 987 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm27910-201ENSMUST00000185004 107 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm28324-201ENSMUST00000187913 264 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm37299-201ENSMUST00000193951 826 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm44980-201ENSMUST00000205826 314 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm45575-201ENSMUST00000210283 548 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.97□□□□□ -0.33
Clp1Q99LI9 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.97□□□□□ -0.33
Clp1Q99LI9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms