Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gm16379-201ENSMUST00000161469 348 ntBASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gm8762-201ENSMUST00000193486 339 ntBASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.93□□□□□ -0.5
Cstf3Q99LI7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm7809-201ENSMUST00000153199 742 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm8738-201ENSMUST00000172606 329 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm3890-201ENSMUST00000182416 207 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm44405-201ENSMUST00000198952 126 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm6266-201ENSMUST00000203844 806 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm44882-201ENSMUST00000205702 802 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.92□□□□□ -0.5
Cstf3Q99LI7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cstf3Q99LI7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm12314-201ENSMUST00000118104 538 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms