Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm8731-201ENSMUST00000118088 412 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm4654-201ENSMUST00000183305 982 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.17■□□□□ 0.02
RtcbQ99LF4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RtcbQ99LF4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm12579-201ENSMUST00000118040 783 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm11660-201ENSMUST00000120955 412 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm29499-201ENSMUST00000189151 486 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm28329-201ENSMUST00000191208 689 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm29171-201ENSMUST00000191397 486 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm17877-201ENSMUST00000192578 814 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm42657-201ENSMUST00000201746 211 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.16■□□□□ 0.02
RtcbQ99LF4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RtcbQ99LF4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm13047-201ENSMUST00000117116 815 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm13937-201ENSMUST00000121000 988 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm23218-201ENSMUST00000158124 276 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm21092-201ENSMUST00000178995 955 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.15■□□□□ 0.02
RtcbQ99LF4 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RtcbQ99LF4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms