Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm44958-201ENSMUST00000203734 736 ntBASIC11.24□□□□□ -0.61
Lims1Q99JW4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm10268-201ENSMUST00000085340 555 ntBASIC11.24□□□□□ -0.61
Lims1Q99JW4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.24□□□□□ -0.61
Lims1Q99JW4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm13736-201ENSMUST00000119272 253 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm12036-201ENSMUST00000120008 530 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm16177-201ENSMUST00000120728 718 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm29649-201ENSMUST00000185649 419 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm29127-201ENSMUST00000188304 517 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.23□□□□□ -0.61
Lims1Q99JW4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lims1Q99JW4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm24830-201ENSMUST00000102024 166 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms