Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Gm5950-201ENSMUST00000213337 772 ntBASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb1Q91Y08 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm13392-201ENSMUST00000117708 150 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm4986-201ENSMUST00000119731 549 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm37489-201ENSMUST00000191883 159 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Gm42693-201ENSMUST00000196779 631 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Olfr284-202ENSMUST00000206647 966 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb1Q91Y08 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms