Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Gm37666-201ENSMUST00000194110 866 ntBASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb18Q91Y02 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm28071-201ENSMUST00000190355 478 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm42937-201ENSMUST00000197360 752 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 AY036118-201ENSMUST00000200021 923 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 AU022133-201ENSMUST00000200601 873 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb18Q91Y02 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms