Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm22817-201ENSMUST00000157448 356 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm7587-201ENSMUST00000207618 1021 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Matn2-206ENSMUST00000228570 2798 ntBASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb20Q91XZ9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm22818-201ENSMUST00000157446 104 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm17042-201ENSMUST00000167075 1216 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm7029-201ENSMUST00000173226 450 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43630-201ENSMUST00000201550 776 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 AC155259.1-201ENSMUST00000214794 477 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 AC153974.1-202ENSMUST00000218700 678 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 CT009728.1-201ENSMUST00000225228 1050 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 AC116487.1-201ENSMUST00000227033 339 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 AC154838.3-201ENSMUST00000228876 965 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms