Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm24231-201ENSMUST00000104315 133 ntBASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Rmrp-201ENSMUST00000157463 271 ntBASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga11Q91XY8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Gm16177-201ENSMUST00000120728 718 ntBASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Gm5370-201ENSMUST00000187187 574 ntBASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Gm10478-201ENSMUST00000084451 396 ntBASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga11Q91XY8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms