Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Gm15547-201ENSMUST00000122152 333 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Gm26461-201ENSMUST00000175064 290 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 AA914427-201ENSMUST00000193194 1166 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx41Q91VN6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm8885-201ENSMUST00000189382 598 ntBASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx41Q91VN6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms