Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps39Q8R5L3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Pck2-205ENSMUST00000226352 2784 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps39Q8R5L3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Vps39Q8R5L3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vps39Q8R5L3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gm7809-201ENSMUST00000153199 742 ntBASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gm3890-201ENSMUST00000182416 207 ntBASIC12.33□□□□□ -0.44
Vps39Q8R5L3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms