Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm23912-201ENSMUST00000104687 87 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm2965-201ENSMUST00000198365 343 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm43916-201ENSMUST00000205062 967 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm10288-201ENSMUST00000084614 537 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp7Q8R1T1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Gm14665-201ENSMUST00000122294 557 ntBASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Gm27530-201ENSMUST00000184096 98 ntBASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp7Q8R1T1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Mir6546-201ENSMUST00000184460 62 ntBASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp7Q8R1T1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms