Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zcchc9Q8R1J3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Rprl1-202ENSMUST00000198476 238 ntBASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zcchc9Q8R1J3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm24514-201ENSMUST00000174961 285 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm5523-201ENSMUST00000180415 997 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Zcchc9Q8R1J3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Zcchc9Q8R1J3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms