Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm13350-201ENSMUST00000120519 479 ntBASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm14381-201ENSMUST00000122105 414 ntBASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Mir6420-201ENSMUST00000185032 102 ntBASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Sf3a1Q8K4Z5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sf3a1Q8K4Z5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sf3a1Q8K4Z5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sf3a1Q8K4Z5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm11930-201ENSMUST00000117788 190 ntBASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sf3a1Q8K4Z5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms