Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.62□□□□□ -0.39
CopaQ8CIE6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopaQ8CIE6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm25668-201ENSMUST00000157700 129 ntBASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm29199-201ENSMUST00000187766 775 ntBASIC12.61□□□□□ -0.39
CopaQ8CIE6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm30285-201ENSMUST00000214614 422 ntBASIC12.61□□□□□ -0.39
CopaQ8CIE6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.61□□□□□ -0.39
CopaQ8CIE6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.6□□□□□ -0.39
CopaQ8CIE6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm38092-201ENSMUST00000195600 653 ntBASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms