Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gm9211-201ENSMUST00000182882 975 ntBASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gm7467-201ENSMUST00000185173 652 ntBASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Gm9555-201ENSMUST00000200908 583 ntBASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc17Q8CE13 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm9062-201ENSMUST00000117712 727 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm12266-201ENSMUST00000120311 962 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm14832-201ENSMUST00000121289 322 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm17040-202ENSMUST00000170597 889 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm8018-201ENSMUST00000173536 789 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm29615-201ENSMUST00000185371 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28224-201ENSMUST00000186078 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm29001-201ENSMUST00000186177 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28292-201ENSMUST00000186593 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28101-201ENSMUST00000187608 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm29076-201ENSMUST00000187689 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28302-201ENSMUST00000187931 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28646-201ENSMUST00000188220 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28205-201ENSMUST00000189177 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm29032-201ENSMUST00000189797 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm28695-201ENSMUST00000190300 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm32999-201ENSMUST00000192693 562 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm37448-201ENSMUST00000192795 697 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms