Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Cog3-203ENSMUST00000227473 4197 ntBASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc87Q8CDL9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc87Q8CDL9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc87Q8CDL9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ccdc87Q8CDL9 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.08□□□□□ -0.31
Ccdc87Q8CDL9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc87Q8CDL9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc87Q8CDL9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc87Q8CDL9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Gm2231-201ENSMUST00000125661 612 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Gm37042-201ENSMUST00000193816 581 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Gm10268-201ENSMUST00000085340 555 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.07□□□□□ -0.32
Ccdc87Q8CDL9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms