Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf2Q8BZT2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm11331-201ENSMUST00000119764 288 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm22902-201ENSMUST00000158488 302 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm42997-202ENSMUST00000200321 985 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf2Q8BZT2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm18734-201ENSMUST00000172937 808 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm37986-201ENSMUST00000193285 383 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm17827-201ENSMUST00000211825 742 ntBASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf2Q8BZT2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh3rf2Q8BZT2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms