Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm15432-201ENSMUST00000121106 195 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm17827-201ENSMUST00000211825 742 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.07□□□□□ -0.32
Rd3Q8BRE0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.07□□□□□ -0.32
Rd3Q8BRE0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gm43962-201ENSMUST00000203898 190 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gm19994-201ENSMUST00000217086 586 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rd3Q8BRE0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.06□□□□□ -0.32
Rd3Q8BRE0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Gm18038-201ENSMUST00000197900 485 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Ntng1-201ENSMUST00000051253 327 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rd3Q8BRE0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rd3Q8BRE0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms