Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm7150-201ENSMUST00000122032 981 ntBASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm44124-201ENSMUST00000204159 472 ntBASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gm11783-201ENSMUST00000119549 885 ntBASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gm26134-201ENSMUST00000178484 110 ntBASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gm7902-201ENSMUST00000198842 947 ntBASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col16a1Q8BLX7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm8723-201ENSMUST00000166076 820 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm8701-201ENSMUST00000169259 874 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Mir6923-201ENSMUST00000184592 72 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm6450-201ENSMUST00000200896 574 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm44315-201ENSMUST00000203041 219 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm19640-201ENSMUST00000214849 464 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm7959-201ENSMUST00000221823 1078 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 AC165154.1-201ENSMUST00000226661 340 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Gm5805-201ENSMUST00000072779 456 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col16a1Q8BLX7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms