Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Srrm4Q8BKA3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.7
Srrm4Q8BKA3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Gm24255-201ENSMUST00000104481 128 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Rmrp-201ENSMUST00000157463 271 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Gm30285-201ENSMUST00000214614 422 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Srrm4Q8BKA3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Gm22323-201ENSMUST00000103832 109 ntBASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Gm25214-201ENSMUST00000104573 129 ntBASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Srrm4Q8BKA3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms