Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2bQ8BJF9 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.65□□□□□ -0.39
Chmp2bQ8BJF9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp2bQ8BJF9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Chmp2bQ8BJF9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.65□□□□□ -0.39
Chmp2bQ8BJF9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp2bQ8BJF9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2bQ8BJF9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2bQ8BJF9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2bQ8BJF9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms