Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm43133-201ENSMUST00000197472 463 ntBASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh20Q8BIZ0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm13813-201ENSMUST00000120998 787 ntBASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm25261-201ENSMUST00000157416 134 ntBASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm6007-201ENSMUST00000208170 823 ntBASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh20Q8BIZ0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm11591-201ENSMUST00000120063 702 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm8099-201ENSMUST00000200510 742 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm18584-201ENSMUST00000203098 964 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms