Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm18187-201ENSMUST00000196476 984 ntBASIC11.92□□□□□ -0.5
Rnf38Q8BI21 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf38Q8BI21 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Rmrp-201ENSMUST00000157463 271 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm27243-201ENSMUST00000183964 521 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm42599-201ENSMUST00000201308 469 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm24526-201ENSMUST00000082921 158 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf38Q8BI21 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms