Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm14999-201ENSMUST00000121039 624 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm27023-201ENSMUST00000182372 285 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm5950-201ENSMUST00000213337 772 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm39404-201ENSMUST00000216350 313 ntBASIC12.22□□□□□ -0.45
Ubp1Q811S7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubp1Q811S7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm25043-201ENSMUST00000158604 212 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm43822-201ENSMUST00000200285 476 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm45865-201ENSMUST00000211815 945 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.21□□□□□ -0.45
Ubp1Q811S7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubp1Q811S7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.21□□□□□ -0.46
Ubp1Q811S7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubp1Q811S7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubp1Q811S7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubp1Q811S7 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubp1Q811S7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubp1Q811S7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ubp1Q811S7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms