Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm23085-201ENSMUST00000157849 293 ntBASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm43184-201ENSMUST00000197247 542 ntBASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm10752-201ENSMUST00000218348 729 ntBASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp6nlQ80XC3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gm8343-201ENSMUST00000182705 994 ntBASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp6nlQ80XC3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gm26286-201ENSMUST00000104166 134 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gm11509-201ENSMUST00000117358 325 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gm14724-201ENSMUST00000118400 537 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gm12029-201ENSMUST00000120073 832 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms