Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.4□□□□□ -0.42
Usp8Q80U87 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp8Q80U87 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usp8Q80U87 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Usp8Q80U87 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm16296-201ENSMUST00000159905 325 ntBASIC12.4□□□□□ -0.42
Usp8Q80U87 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.4□□□□□ -0.42
Usp8Q80U87 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm29649-201ENSMUST00000185649 419 ntBASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.4□□□□□ -0.42
Usp8Q80U87 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp8Q80U87 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp8Q80U87 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp8Q80U87 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp8Q80U87 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp8Q80U87 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.4□□□□□ -0.43
Usp8Q80U87 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Usp8Q80U87 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp8Q80U87 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp8Q80U87 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.39□□□□□ -0.43
Usp8Q80U87 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp8Q80U87 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Usp8Q80U87 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp8Q80U87 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp8Q80U87 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm26927-201ENSMUST00000182385 965 ntBASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp8Q80U87 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp8Q80U87 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.39□□□□□ -0.43
Usp8Q80U87 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp8Q80U87 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp8Q80U87 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.39□□□□□ -0.43
Usp8Q80U87 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp8Q80U87 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp8Q80U87 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.38□□□□□ -0.43
Usp8Q80U87 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms