Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm22920-201ENSMUST00000102175 109 ntBASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm14193-201ENSMUST00000105067 153 ntBASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm44329-201ENSMUST00000197469 112 ntBASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx55Q6ZPL9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm15004-201ENSMUST00000119192 630 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm11340-201ENSMUST00000119226 412 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm5419-201ENSMUST00000119301 527 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Mir1956-201ENSMUST00000157748 65 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm28388-201ENSMUST00000186262 437 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm9645-201ENSMUST00000197131 792 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx55Q6ZPL9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm13916-201ENSMUST00000117368 628 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm11660-201ENSMUST00000120955 412 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm21092-201ENSMUST00000178995 955 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms