Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm12036-201ENSMUST00000120008 530 ntBASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup98Q6PFD9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm23771-201ENSMUST00000178702 110 ntBASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm7504-201ENSMUST00000201449 424 ntBASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm8574-201ENSMUST00000203207 924 ntBASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup98Q6PFD9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Gm3551-201ENSMUST00000190750 664 ntBASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup98Q6PFD9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Gm4978-201ENSMUST00000071565 801 ntBASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup98Q6PFD9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms