Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm11663-201ENSMUST00000117888 290 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Rprl1-201ENSMUST00000158050 327 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm6407-201ENSMUST00000176468 549 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm8492-201ENSMUST00000182375 987 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Snrnp40Q6PE01 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm22138-201ENSMUST00000158748 128 ntBASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Mir7076-201ENSMUST00000183519 74 ntBASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm27910-201ENSMUST00000185004 107 ntBASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Snrnp40Q6PE01 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms