Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm5419-201ENSMUST00000119301 527 ntBASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm3332-201ENSMUST00000189337 928 ntBASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm44124-201ENSMUST00000204159 472 ntBASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm21811-201ENSMUST00000096485 930 ntBASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Krt40Q6IFX3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm12196-201ENSMUST00000120954 262 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm25881-201ENSMUST00000157783 103 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm18893-201ENSMUST00000198416 943 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm43378-201ENSMUST00000199336 582 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm8956-201ENSMUST00000203939 825 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Gm5369-201ENSMUST00000217499 588 ntBASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Krt40Q6IFX3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm11509-201ENSMUST00000117358 325 ntBASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm13035-201ENSMUST00000117496 342 ntBASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Gm37986-201ENSMUST00000193285 383 ntBASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt40Q6IFX3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms