Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 AC165260.5-201ENSMUST00000224640 1247 ntBASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Mir483-201ENSMUST00000093631 73 ntBASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scaf8Q6DID3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm13600-201ENSMUST00000117949 744 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm22877-201ENSMUST00000175451 105 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm43186-201ENSMUST00000198130 824 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 AC154252.1-201ENSMUST00000226041 473 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf8Q6DID3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf8Q6DID3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf8Q6DID3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf8Q6DID3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.46□□□□□ -0.1
Scaf8Q6DID3 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.46□□□□□ -0.1
Scaf8Q6DID3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf8Q6DID3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gm37017-201ENSMUST00000195266 747 ntBASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.45□□□□□ -0.1
Scaf8Q6DID3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf8Q6DID3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms